nf-core Pipelines Skills Index

The nf-core skills index helps you locate standardized omics pipelines by exposing pipeline metadata. You can discover workflows across transcriptomics, epigenomics, spatial omics, and variant calling, then access their documentation to understand their capabilities.

nf-core provides community-curated, standardized workflows for bioinformatics and omics data analysis. It is used to process data across domains like genomics and transcriptomics, ensuring reproducible research through community-curated pipelines.

You can access installation guidance, parameter references, and usage examples for nf-core pipelines by opening the Markdown documentation paired with each pipeline entry in the skills index, which covers usage, parameters, and outputs.

Yes, the nf-core skills index supports spatial omics and epigenomics workflows. It allows you to discover and access pipelines across a broad range of omics categories including transcriptomics and variant calling.

Yes, you can use the nf-core skills index as a learning resource to bootstrap workflows in research projects. The index provides access to official docs, parameter references, and usage examples to help you get started with Nextflow.