nv-segment-ctmr
CommunityNV-Segment-CTMR CT/MRI segmentation wrapper
Authorsayalinvidia
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Provides a lightweight engineering wrapper around the NV-Segment-CTMR MONAI bundle to generate a structured label-map output for a given CT or MRI volume, including provenance data.
Core Features & Use Cases
- Thin shell that invokes python -m monai.bundle run with a defined config and input dictionary, returning a label map and a JSON report.
- Manages inputs (ct_or_mr_volume, modality) and optional ground-truth references for verifiers; captures model inventory and upstream commit.
- Intended for engineering verification, research QA, and automated workflow testing of segmentation pipelines.
Quick Start
Run the wrapper to segment a CT or MRI volume and emit a labeled mask and JSON report.
Dependency Matrix
Required Modules
nibabelnumpytyper
Components
scripts
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