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openclaw-fastqc

Community

Automated FASTQ QC and actionable next steps.

Data & Analytics#troubleshooting#quality-control#quality-metrics#fastqc#fastq#adapter-contamination#ngs-prealignment
Authorya-way
Version1.0.0
Installs0

System Documentation

What problem does it solve?

FASTQ quality control is essential to identify adapter contamination, low-quality bases, and other sequencing issues before alignment.

Core Features & Use Cases

  • Run FastQC on input FASTQ files to assess quality metrics.
  • Interpret FastQC reports and highlight potential problems (adapter contamination, per-base quality drops).
  • Propose actionable next steps (trim, recheck, resequence) and generate a concise report.
  • Use case: pre-alignment QC in RNA-seq or DNA-seq pipelines to decide if data is ready for alignment.

Quick Start

Run FastQC on your input FASTQ files to generate a quality report and receive recommended next steps.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: openclaw-fastqc
Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#openclaw-fastqc

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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