paper-analyze

Analyze scholarly papers to generate structured Obsidian Markdown notes with metadata and figures.

2|Updated Apr 12, 2026
One-click install
npx skills add https://github.com/Clay-HHK/claude-config --skill paper-analyze-clay-hhk
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: paper-analyze
Source: https://github.com/Clay-HHK/claude-config/tree/main/skills/paper-analyze
Command: npx skills add https://github.com/Clay-HHK/claude-config --skill paper-analyze-clay-hhk

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) components.

What problem does it solve?

This Skill deeply analyzes a single research paper to generate comprehensive notes and evaluative content with rich visual details.

Core Features & Use Cases

  • Automatic extraction of key concepts, research questions, methods, experiments, and conclusions into structured notes.
  • Support for image and diagram inclusion with image indexing for Obsidian.
  • Generate a knowledge-graph-friendly summary with linked references to related papers and notes.

Quick Start

Analyze a specified paper and generate an Obsidian-ready, richly formatted note with sources and visual content.

Frequently Asked Questions about paper-analyze

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I analyze an arXiv paper and generate Obsidian markdown notes?

To analyze an arXiv paper and generate Obsidian markdown notes, this Skill extracts metadata, PDFs, and figures to produce structured notes with image references and Obsidian-friendly frontmatter. It automatically identifies key concepts, methods, and conclusions for your knowledge base.

Can I extract images and figures from a scholarly paper for my markdown notes?

Yes, you can extract images and figures from a scholarly paper for your markdown notes. The Skill includes optional image extraction steps, indexing visual content and diagrams with image references specifically formatted for Obsidian integration.

How do I create a knowledge graph entry from a research paper?

To create a knowledge graph entry from a research paper, this Skill generates a knowledge-graph-friendly summary with linked references to related papers and notes. It structures the extracted concepts and evaluative content into a connected markdown format.

Does this paper analysis tool work with local notes or only arXiv links?

This paper analysis tool works with both arXiv papers and local notes. You can apply it to a specified scholarly paper or existing local markdown files to extract metadata and generate comprehensive, richly formatted notes.

What is the best way to structure research paper metadata for a knowledge base?

The best way to structure research paper metadata for a knowledge base is to use Obsidian-friendly frontmatter and tags. This Skill automatically maps extracted metadata, figures, and key concepts into a comprehensive markdown note with structured tags.

Are there limitations when generating comprehensive notes from complex PDF diagrams?

When generating comprehensive notes from complex PDF diagrams, image extraction is handled as an optional wired step to ensure accurate indexing. The Skill focuses on extracting visual details and text, but highly complex layouts may require manual review within Obsidian.