phasing-imputation
CommunityEfficient haplotype phasing and imputation.
Authorzongtingwei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Phasing-imputation solves the challenge of generating haplotype-resolved and imputed genotypes from genotype data.
Core Features & Use Cases
- Phasing genotypes to create haplotype-aware data suitable for downstream analyses.
- Imputing missing variants using reference panels with QC metrics to assess confidence.
- Use Case: Researchers with array or sequencing-derived genotypes can obtain phased genotypes, imputed variants, and QC summaries for association studies.
Quick Start
Provide VCF genotype data, sample metadata, and a matched reference panel to start phasing and imputation.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
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Please help me install this Skill: Name: phasing-imputation Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#phasing-imputation Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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