pls-toolbox-preprocessing

Calibrate and apply MATLAB PLS_Toolbox preprocessing pipelines for spectral data.

1|Updated Oct 20, 2025
One-click install
npx skills add https://github.com/eigenvector-research-inc/pls_toolbox-cli-examples --skill pls-toolbox-preprocessing
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: pls-toolbox-preprocessing
Source: https://github.com/eigenvector-research-inc/pls_toolbox-cli-examples/tree/main/skills/pls-toolbox-preprocessing
Command: npx skills add https://github.com/eigenvector-research-inc/pls_toolbox-cli-examples --skill pls-toolbox-preprocessing

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

This Skill provides a structured reference to the PLS_Toolbox preprocess function, enabling users to build, calibrate, apply, and undo preprocessing pipelines in MATLAB.

Core Features & Use Cases

  • Calibrate preprocessing parameters from training data and store them in a structured object.
  • Apply calibrated preprocessing to new data to ensure consistent transformations.
  • Undo preprocessing where possible to recover original data for validation or comparison.
  • Use cases include preparing spectral data for PLS models, enforcing consistent scaling, normalization, and derivative calculations across datasets.

Quick Start

Create a preprocessing pipeline with preprocess('default', 'mean center'), calibrate on your training data, and apply it to new samples.

Frequently Asked Questions about pls-toolbox-preprocessing

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I build a preprocessing pipeline for spectral data in MATLAB?

To ensure consistent preprocessing across datasets, you must calibrate preprocessing parameters from your training data and store them in a structured object. You then apply this calibrated pipeline to new data samples, which enforces identical scaling, normalization, and derivative transformations for accurate multivariate model validation.

Can I undo preprocessing transformations on PLS_Toolbox models?

Yes, you can undo preprocessing transformations on PLS_Toolbox models where mathematically possible. The undo workflow allows you to recover original data after applying calibrated preprocessing, which is essential for validating multivariate models and comparing transformed spectral data against initial measurements.

Does PLS_Toolbox support multi-step scaling and normalization workflows?

Yes, PLS_Toolbox supports multi-step scaling and normalization workflows through its preprocess function. You can chain multiple preprocessing operations together, such as combining scaling, centering, and derivative calculations, to create a comprehensive pipeline that integrates directly with EVRIModel objects.

What is the best way to prepare spectral data for PLS models?

The best way to prepare spectral data for PLS models is to construct a structured preprocessing pipeline using the PLS_Toolbox preprocess function. Start with preprocess('default', 'mean center'), calibrate the pipeline on your training set, and apply the consistent transformations to all subsequent data.

When do I need to calibrate a preprocessing pipeline?

You need to calibrate a preprocessing pipeline when you want to enforce consistent scaling, normalization, and derivative calculations across different datasets. Calibrating extracts parameters from your training data and stores them in a structured object, ensuring new data undergoes identical transformations for reliable PLS_Toolbox model performance.