protein-ligand-binding-analysis-plip
CommunityAnalyze protein-ligand interactions with PLIP.
AuthorPharMolix
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Analyzes protein-ligand interactions in PDB structures using PLIP to identify hydrogen bonds, hydrophobic contacts, π-stacking, salt bridges, and water bridges, enabling rapid interpretation of binding modes.
Core Features & Use Cases
- Identify and summarize protein-ligand interactions per ligand
- Generate Markdown interaction reports and 3D visualizations
- Support batch processing and comparative binding analyses across multiple structures
Quick Start
Provide a PDB file to analyze with PLIP and generate an interaction report plus 3D visualizations.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: protein-ligand-binding-analysis-plip Download link: https://github.com/PharMolix/OpenBioMed/archive/main.zip#protein-ligand-binding-analysis-plip Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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