Search PubMed via NCBI Entrez and BioPython for ranked biomedical literature metadata.
npx skills add https://github.com/Runchuan-BU/BioClaw --skill pubmed-search
Please help me install this Agent Skill. Skill: pubmed-search Source: https://github.com/Runchuan-BU/BioClaw/tree/main/.claude/skills/pubmed-search Command: npx skills add https://github.com/Runchuan-BU/BioClaw --skill pubmed-search
This Skill removes the friction of manually searching PubMed by programmatically locating, fetching, and summarizing relevant biomedical literature so researchers can quickly discover and reference key papers.
Search PubMed for recent CRISPR delivery methods and return the top five results with PMIDs, title, first author, journal, year, and a brief abstract.
High-intent search queries and answers about installing and using this skill.
To search PubMed for biomedical literature, construct a query using keywords, journal names, dates, and publication-type filters. The Skill uses NCBI Entrez via BioPython to perform esearch and efetch, returning PMIDs, titles, first authors, journal names, publication years, and trimmed abstracts with PubMed URLs.
Yes, you can filter PubMed literature searches by publication type and date range. The Skill supports targeted query construction with title-specific, journal, date, and publication-type filters to locate relevant biomedical papers and retrieve ranked article identifiers and metadata.
The best way to retrieve PubMed article metadata for references is using a programmatic search that fetches PMIDs, titles, first authors, journal names, publication years, and abstracts. This Skill formats results into concise lists with links, enabling quick triage of review articles and experimental reports.
Yes, BioPython Entrez supports fetching abstracts and PubMed URLs. The Skill applies NCBI Entrez esearch and efetch to retrieve trimmed abstracts, article identifiers, and metadata, then outputs chat-ready result lists with direct PubMed URLs and follow-up summary suggestions.
To find recent review articles on a specific biomedical topic, search PubMed with keyword filters and a review publication-type constraint. The Skill locates and ranks matching literature, returning PMIDs, titles, authors, journal names, years, and abstracts for quick topical surveys.
Using Entrez esearch for PubMed literature discovery limits results to ranked article identifiers and trimmed abstracts rather than full-text papers. The Skill focuses on metadata retrieval and literature triage, producing concise summaries with links instead of complete publication text.
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gexijinSearch PubMed via E-utilities and return titles, authors, abstracts, and PMIDs.
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IDEA-XLQuery PubMed via Biopython Entrez and return structured article metadata.
