qtl-analysis

Community

Coordinate open-source QTL analysis for breeding.

AuthorborealBytes
Version1.0.0
Installs0

System Documentation

What problem does it solve?

The QTL Analysis skill orchestrates multiple open-source tools to run end-to-end QTL workflows across GWAS, eQTL mapping, and classical QTL analyses, enabling reproducible breeding insights.

Core Features & Use Cases

  • Orchestrates GWAS, eQTL, and classical QTL pipelines with curated toolchains.
  • Provides end-to-end workflows and reproducible examples for breeding analyses.
  • Includes worked examples and data resources for common crosses (F2, BC, RIL, DO).

Quick Start

Run the QTL Analysis workflow from the repository root by following the main entrypoint described in SKILL.md to execute the included examples.

Dependency Matrix

Required Modules

pandasnumpymatplotlibscipytorchtensorqtlqtl

Components

scriptsreferences

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: qtl-analysis
Download link: https://github.com/borealBytes/my-farm-advisor/archive/main.zip#qtl-analysis

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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