replicate-study
OfficialReplicate published studies in new databases.
AuthorAperivue
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Replicate-study enables researchers to transplant a published study methodology to a different database by extracting study design, mapping variables via a harmonization table, generating analysis code, and creating a replication difference report.
Core Features & Use Cases
- Source paper analysis: extract study design, database details, exposure, outcomes, and covariates from a source paper.
- Variable mapping & code generation: map variables to the target database and generate reproducible analysis scripts (Python + R) and a difference report.
- Phase-driven workflow: Phase 1: Source Paper Analysis; Phase 2: Variable Mapping; Phase 3: Code Generation; Phase 4: Difference Report; Phase 5: Validation.
- Output artifacts: structured replication_report.md, variable_mapping.csv, analysis_code.py/R, and results/ directory.
Quick Start
Provide the source paper, target database path, and optional harmonization table, then invoke the replication workflow to generate outputs.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
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Please help me install this Skill: Name: replicate-study Download link: https://github.com/Aperivue/medsci-skills/archive/main.zip#replicate-study Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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