research-pipeline

Automate academic research workflows from idea generation to paper submission.

2|Updated Aug 12, 2025
One-click install
npx skills add https://github.com/goupup-ai/miccai25 --skill research-pipeline-goupup-ai
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: research-pipeline
Source: https://github.com/goupup-ai/miccai25/tree/main/ARIS/skills/research-pipeline
Command: npx skills add https://github.com/goupup-ai/miccai25 --skill research-pipeline-goupup-ai

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Academic researchers often struggle with fragmented, manual workflows that slow down the transition from initial research ideas to published papers, leading to inconsistent progress, wasted compute resources, and missed submission deadlines.

Core Features & Use Cases

  • Full lifecycle orchestration: Automates the complete research workflow from idea discovery and literature review through experiment implementation, iterative review, and paper writing handoff.
  • Autonomous experiment management: Handles code implementation, cross-model code review, experiment deployment, and ablation planning with resumable state tracking for long-running GPU workloads.
  • Use Case: A researcher working on medical image segmentation can input their research direction, and the pipeline will automatically generate validated ideas, run experiments, iterate based on adversarial reviewer feedback, and produce a polished narrative report ready for paper submission.

Quick Start

Use the research-pipeline skill with your research direction to run the complete end-to-end research workflow from idea discovery to paper submission preparation.

Frequently Asked Questions about research-pipeline

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate the academic research pipeline from idea generation to paper writing?

To automate the academic research pipeline, you input your research direction to trigger full lifecycle orchestration. The system autonomously handles idea discovery, experiment implementation, iterative peer review, and structured handoff to paper writing tools.

Can I resume long-running GPU experiments if my autonomous research workflow is interrupted?

Yes, you can resume long-running GPU experiments using the pipeline's resumable state tracking. This feature ensures experiment deployment and ablation planning maintain consistent progress without wasting compute resources after interruptions.

Does the research pipeline support medical imaging and computer vision projects?

Yes, the research pipeline supports medical imaging, computer vision, and other AI research domains requiring validated idea piloting. It manages the complete workflow from idea generation through experiment execution to paper submission preparation.

How does cross-model code review work during experiment automation?

Cross-model code review during experiment automation evaluates your implementation using multiple AI models to identify issues. This iterative review process improves code quality and research outcomes before proceeding to ablation planning and paper writing handoff.

What is the best way to manage fragmented manual workflows for academic research?

The best way to manage fragmented academic research workflows is using full lifecycle orchestration that eliminates manual coordination. It automates transitions between idea discovery, experiment execution, adversarial reviewer feedback iteration, and paper submission.

Do I need specific dependencies to run the end-to-end research workflow?

No specific dependencies are required to run the end-to-end research workflow. You simply provide your research direction as input, and the pipeline manages code implementation, GPU experiment deployment, and structured paper writing handoff autonomously.