rna-quantification
CommunityQuantify RNA-seq gene and transcript abundances.
Authorzongtingwei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
RNA-quantification workflows automate the process of converting RNA-seq reads into gene-level counts and transcript-level abundances, enabling downstream analyses and reporting with reproducible steps.
Core Features & Use Cases
- Supports alignment-based and alignment-free quantification to accommodate different data and pipelines.
- Generates gene counts, transcript abundances, and QC summaries for reliable downstream analyses.
- Use Case: When you need expression estimates for differential expression or tximport-style workflows, this skill provides a complete quantification path.
Quick Start
Run the quantification workflow on RNA-seq data using salmon or kallisto to generate gene counts and transcript abundances.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: rna-quantification Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#rna-quantification Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 510,000+ vetted skills library on demand.