scientific-admet-pharmacokinetics

Predict ADMET properties and PK parameters for small-molecule libraries.

3|1|Updated Feb 11, 2026
One-click install
npx skills add https://github.com/nahisaho/satori --skill scientific-admet-pharmacokinetics
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: scientific-admet-pharmacokinetics
Source: https://github.com/nahisaho/satori/tree/main/src/.github/skills/scientific-admet-pharmacokinetics
Command: npx skills add https://github.com/nahisaho/satori --skill scientific-admet-pharmacokinetics

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

ADMET prediction and pharmacokinetic modeling support early-stage drug discovery by providing integrated evaluation of absorption, distribution, metabolism, excretion, and toxicity properties.

Core Features & Use Cases

  • ADMET/pk prediction and PK/PD modeling to guide lead optimization.
  • Drug-likeness assessment and multi-tool integration (DeepChem/ADMET-AI/PyTDC; PubChem for property data).
  • Use Case: Given a library of small molecules, estimate ADMET profiles and PK parameters to prioritize candidates for synthesis.

Quick Start

Run the ADMET pipeline with input SMILES or SDF files to generate an ADMET profile and PK parameters.

Frequently Asked Questions about scientific-admet-pharmacokinetics

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I predict ADMET properties for a library of small molecules?

Run the ADMET pipeline with input SMILES or SDF files to generate an ADMET profile and PK parameters. The pipeline integrates multi-tool predictions and cross-checks for validation.

What is ADMET prediction and pharmacokinetic modeling used for in drug discovery?

ADMET prediction and pharmacokinetic modeling evaluate absorption, distribution, metabolism, excretion, and toxicity to assess candidate compounds early in drug discovery. This integrated evaluation guides lead optimization and prioritizes molecules for synthesis.

Can I use this ADMET pipeline for PK/PD parameter estimation and drug-likeness assessment?

Yes, the pipeline handles PK/PD parameter estimation and drug-likeness assessment by integrating DeepChem, ADMET-AI, and PyTDC predictions. It retrieves property data from PubChem to validate cross-checks and export complete profiles for decision making.

What's the best way to assess toxicity and pharmacokinetics for lead optimization?

The best way to assess toxicity and pharmacokinetics for lead optimization is running integrated multi-tool predictions that cross-check ADMET profiles against PubChem property data. This validates absorption, distribution, metabolism, excretion, and toxicity results for candidate compounds.

Do I need SMILES or SDF files to run predictive modeling for drug-likeness?

Yes, you need input SMILES or SDF files to run predictive modeling for drug-likeness and ADMET profiles. These chemical structure formats provide the molecular representations required to execute multi-tool predictions and generate PK parameters.