scientific-data-submission
CommunityFAIR-compliant scientific data submission workflow.
Authornahisaho
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Scientific data submission and FAIR-compliant archiving can be error-prone and manual; this Skill automates registering and archiving data across major repositories such as GenBank, SRA, ENA, GEO, and BioProject, and helps manage associated metadata.
Core Features & Use Cases
- Automates creation of BioProject and BioSample metadata to structure repository submissions.
- Generates submission-ready artifacts for GenBank, SRA, ENA, GEO, and BioProject, ensuring FAIR principles are applied to data.
- Use Case: A researcher prepares sequencing data and expression datasets and needs to register them across repositories to enable discoverability and reuse.
Quick Start
Provide your BioProject title, description, and organism to generate metadata and submission-ready artifacts for GenBank, SRA, ENA, GEO, and BioProject.
Dependency Matrix
Required Modules
pandas
Components
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: scientific-data-submission Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-data-submission Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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