scientific-parasite-genomics
CommunityREST-based parasite genomics for gene searches.
Authornahisaho
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Enables researchers to perform parasite genome searches, retrieve gene information, and identify drug-target candidates by interfacing with PlasmoDB, VectorBase, ToxoDB and TriTrypDB via REST APIs.
Core Features & Use Cases
- REST API driven genome and gene search across PlasmoDB, VectorBase, ToxoDB, and TriTrypDB to accelerate parasite research.
- Gene function annotation retrieval (GO, InterPro, pathways) to support downstream analyses.
- Drug-target discovery workflow by integrating search, annotation, and target prioritization for malaria parasites and kinetoplastids.
- Integrated pipeline outputs (genes.csv, annotations.csv, drug_targets.csv) for reproducible genomics studies.
Quick Start
Use the REST API to search for genes in a specified parasite genome and generate a candidate drug target list.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: scientific-parasite-genomics Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-parasite-genomics Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.