Analyze biological sequence, tree, and microbiome data workflows in Python.
npx skills add https://github.com/jasrajtulsi/GRAD-SCOPE --skill scikit-bio-jasrajtulsi
Please help me install this Agent Skill. Skill: scikit-bio Source: https://github.com/jasrajtulsi/GRAD-SCOPE/tree/main/.claude/skills/scikit-bio Command: npx skills add https://github.com/jasrajtulsi/GRAD-SCOPE --skill scikit-bio-jasrajtulsi
This Skill helps you analyze biological data in a structured way, reducing the manual effort involved in sequence handling, phylogenetic analysis, microbiome workflows, and statistical interpretation.
Ask me to analyze your biological sequences, trees, or microbiome tables with scikit-bio and I will prepare the appropriate Python workflow for your files.
High-intent search queries and answers about installing and using this skill.
You can calculate alpha and beta diversity from microbiome tables in Python by processing BIOM tabular inputs through this Skill, which computes community diversity metrics and runs permutation-based ecological statistics like PERMANOVA for sample comparison.
The best way to run PERMANOVA and ordination on biological sequencing data is using this Skill to load sequencing files, compute distance matrices, and generate publication-ready ordination results from a single Python workflow.
Yes, you can read and write FASTA and Newick files for phylogenetic tree analysis. This Skill handles biological data I/O, allowing you to load tree formats, build phylogenetic structures, and compare them within your Python environment.
Yes, this approach supports pairwise alignment for DNA, RNA, and protein sequences. The Skill applies sequence and alignment analysis workflows, including motif searching, directly on biological sequence data in Python.
Yes, you need scikit-bio objects to perform distance matrix and ecological statistics tasks. The Skill requires these specific Python objects to execute file I/O, alignment, and permutation-based diversity workflows accurately.
qinyan-aiAnalyze biological data with scikit-bio for sequence manipulation, phylogenetics, and diversity analysis.
Estrella-231Compute diversity, ordination, and statistical summaries from sequence-derived inputs.
jackspaceAnalyze biological sequences for microbiome and ecological data interpretation.
robinbarvaagAnalyze biological sequences, trees, and diversity metrics with scikit-bio.
