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small-rna-seq

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End-to-end small RNA data workflow.

Data & Analytics#workflow#bioinformatics#differential-expression#sequencing#mirna#small-rna#miRge3
Authorzongtingwei
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Automate preprocessing, quantification, differential analysis, and interpretation of small RNA sequencing data.

Core Features & Use Cases

  • miRNA-focused preprocessing and quantification pipelines
  • Differential expression analysis and target-oriented interpretation
  • Use Case: Apply to miRNA-seq datasets to compare samples and summarize target candidates

Quick Start

Provide raw small RNA FASTQ files and adapter sequences to run the end-to-end workflow and obtain counts, differential results, and target summaries.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: small-rna-seq
Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#small-rna-seq

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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