Automate SLURM job submission with dedup, git, and monitoring checks.
npx skills add https://github.com/KangOxford/auto-quant-research --skill submit-job
Please help me install this Agent Skill. Skill: submit-job Source: https://github.com/KangOxford/auto-quant-research/tree/main/execution-layer/skills/submit-job Command: npx skills add https://github.com/KangOxford/auto-quant-research --skill submit-job
Automates the end-to-end SLURM submission workflow with built-in safety checks to prevent duplicates, dirty trees, and unsafe submissions.
Ensure a clean git state and run the submit-job workflow to perform dedup checks, commit, and submit the SLURM job.
High-intent search queries and answers about installing and using this skill.
Automating SLURM job submission with safeguards requires scanning squeue for duplicates, verifying a clean git state, printing config tables for confirmation, running sbatch with descriptive job names, appending to live_jobs.md, and launching background post-submit monitoring.
The best way to prevent duplicate sbatch jobs is running a pre-submission dedup check that scans squeue before submitting, ensuring new jobs do not conflict with existing queued or running tasks in the SLURM environment.
While SLURM itself does not require a clean git tree, enforcing a commit check before sbatch submission prevents submitting jobs with untracked or unstaged changes, ensuring reproducibility and traceability across HPC batch runs.
To monitor sbatch job status after SLURM submission, launch a background post-submit monitoring workflow that observes job status, updates live logs, saves monitor state to files, and recovers monitors after session reconnects.
Automated sbatch submission with built-in commit checks blocks jobs when untracked or unstaged git changes exist, requiring you to commit or stash modifications before executing the SLURM submission workflow.
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