tda-graph-network-analysis

Construct, analyze, and visualize graphs within TDL using NetworkX.

1|Updated Dec 13, 2025
One-click install
npx skills add https://github.com/stephendor/TDL --skill tda-graph-network-analysis
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: tda-graph-network-analysis
Source: https://github.com/stephendor/TDL/tree/main/.agents/skills/tda-graph-network-analysis
Command: npx skills add https://github.com/stephendor/TDL --skill tda-graph-network-analysis

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires networkx, torch_geometric, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

This Skill addresses the challenge of constructing and analyzing complex networks and graphs, such as Mapper graphs, employment-state transition graphs, and social networks within the TDL environment.

Core Features & Use Cases

  • Graph Construction: Supports construction of various graph types tailored to scientific analysis.
  • Semantic Definition: Offers detailed definitions for node and edge semantics.
  • Metrics Computation: Calculates relevant graph metrics for specific scientific questions.
  • Visualization: Allows for visualization of graphs with specified layout algorithms and seeds.
  • Integration with Other Skills: Facilitates integration with related skills like tda-representation-diagnostics for embedding dependencies and tda-visualisation-and-diagramming for graph figures.

Quick Start

To analyze a graph using the tda-graph-network-analysis skill, run the following command: Use the tda-graph-network-analysis skill to analyze the Mapper graph constructed from the UMAP embedding of 'data.csv'.

Frequently Asked Questions about tda-graph-network-analysis

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I construct and analyze complex networks like Mapper graphs in TDL?

To construct and analyze complex networks like Mapper graphs in TDL, you can use this Skill to automate graph construction, calculate graph metrics, and visualize networks for scientific inquiry using NetworkX.

Does this graph analysis Skill support graph-learning tasks with torch-geometric?

This graph analysis Skill supports optional graph-learning tasks using the torch-geometric dependency, while requiring NetworkX for immediate graph construction, analysis, and visualization operations.

What types of graphs can I build for social network analysis and transition graphs?

You can build various graph types for social network analysis and transition graphs, with the Skill offering detailed semantic definitions for nodes and edges tailored to specific scientific questions.

How do I visualize graph metrics and layouts for scientific analysis?

To visualize graph metrics and layouts for scientific analysis, the Skill allows visualization of graphs using specified layout algorithms and seeds, and integrates with diagramming tools for generating figures.

Do I need NetworkX to calculate graph metrics for employment-state transition graphs?

You need NetworkX to calculate graph metrics for employment-state transition graphs, as it is a required dependency for immediate graph operations, while torch-geometric is optional for learning tasks.

Can I integrate embedding dependencies when analyzing graph topology?

When analyzing graph topology, you can integrate embedding dependencies by combining this Skill with related diagnostics skills to support semantic definitions and enhance network analysis workflows.