upgrade

Run a scaffold comparison to detect structural drift by reading user data and scaffold templates in parallel. It identifies missing files, sections, and directory gaps to ensure your data aligns with the canonical plugin layout.

Your CLAUDE.md registry experiences drift as the plugin evolves, causing missing or outdated rules. A file audit reads your data root to find these registry mismatches and prepares safe updates to reconcile the structure.

The best way to reconcile user data directories is through a read-only parallel analysis that identifies convention and registry drift. It produces tiered auto-fixes, proposed migrations, and a structured upgrade report for safe reconciliation.

Yes, you can automatically apply structural fixes through tiered remediation. The process auto-applies safe structural fixes, proposes moves and migrations for approval, and reports issues for later action across memory and sync directories.

You should run a file audit for plugin migration and convention drift after plugin updates or during scheduled audits. This timing ensures your assistant data roots, including outputs and sync files, remain aligned with expected layouts.