variant-calling
CommunityEnd-to-end variant discovery and interpretation.
Authorzongtingwei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides an end-to-end workflow for identifying, filtering, annotating, and interpreting small variants and structural variants from sequencing data, enabling robust discovery and downstream analysis.
Core Features & Use Cases
- Germline, somatic, and structural variant discovery across whole-genome and targeted sequencing data.
- Automated filtering and annotation to prioritize clinically or research-relevant variants.
- Use Case: Researchers can run a complete variant-calling pipeline from BAM/CRAM to annotated VCFs for reporting or further interpretation.
Quick Start
Initiate a canonical variant-calling workflow starting from aligned reads to produce VCFs with basic annotations.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: variant-calling Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#variant-calling Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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