wgs-prs
CommunityAutomate whole-genome sequencing to polygenic risk score analysis.
AuthorMubasherMohammed
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates the entire process of converting whole-genome sequencing data into polygenic risk scores, saving time and reducing the complexity of bioinformatics analysis.
Core Features & Use Cases
- End-to-End Pipeline: Handles variant calling, VCF quality control, and polygenic risk score computation.
- Flexible Input: Accepts both paired-end FASTQ files and pre-existing VCF files.
- Use Case: Ideal for researchers who need to quickly analyze large sets of whole-genome sequencing data and obtain risk scores without manual processing.
Quick Start
Run the wgs-prs skill with the provided paired-end FASTQ files and sample ID.
Dependency Matrix
Required Modules
python3nextflowdockersingularitybcftools
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: wgs-prs Download link: https://github.com/MubasherMohammed/opencode-BioInfo/archive/main.zip#wgs-prs Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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