Seyed (Yahya) Shirazi
Community@neuromechanist
Assistant Project Scientist @sccn
Agent Skills by Seyed (Yahya) Shirazi
Showing 23 vetted skills indexed across 1 GitHub repositories.
manuscript-writing
Draft and revise academic manuscript sections using structured templates.
paper-review
Analyze academic manuscripts in PDF or Markdown for methodological rigor and statistical validity.
manuscript-formatting
Converts manuscripts to specified formats with citation and JAMA compliance.
lit-review
Plans, collects, synthesizes, and documents academic research articles for structured literature reviews.
humanizer
Detects and replaces artificial language patterns in academic and professional texts to improve natural flow.
ci-scaffolding
Generate CI/CD pipelines for Python and JavaScript projects.
document-processing
Extract text, tables, and data from PDFs and images via OCR.
workflow-reference
Manage multi-phase development workflows with git worktrees and GitHub issues.
update-rules
Synchronize project rules and documentation with latest templates.
security-audit
Scan dependencies, code patterns, and configuration files for vulnerabilities and secrets.
docker-packaging
Generate Dockerfiles and docker-compose configurations for project containerization.
init-project
Automate project scaffolding with templates for Python, JavaScript, and Rust.
plot-styling
Apply journal-specific SciencePlots styles to Python matplotlib figures and export SVG files.
scientific-figure
Assemble SVG panels into journal-sized figures with font validation.
ai-full-figure
Generate stylized scientific images and overlay labels, arrows, and scale bars.
transparent-icons
Generate flat scientific icons with transparent backgrounds via AI models.
svg-figure
Create schematic SVG diagrams with precise element placement and annotations.
opencite
Search academic databases, manage citations, and convert PDFs to markdown via CLI.
presentation-builder
Convert structured JSON into interactive Reveal.js presentations with diagrams and math.
bids-conversion
Convert neuroscience datasets into BIDS format and validate compliance.
experiment-design
Design and implement neuroscience experiments with PsychoPy and Lab Streaming Layer synchronization.
grant-review
Analyze grant proposals against NIH and NSF review criteria.
grant-writing
Guide research grant proposal creation with agency-specific templates and section drafting.