Jingcheng Yang
Community@yjcyxky · Anywhere
[Past - Cardiothoracic Surgeon] - [Present - Software Developer] - [Future - Data Scientist]
Agent Skills by Jingcheng Yang
Showing 14 vetted skills indexed across 1 GitHub repositories.
yjcyxkyimmunebuilder
Predicts immune-protein structures from sequence or FASTA inputs using GPU-accelerated Docker models.
yjcyxkyfoundry
Run RosettaCommons Foundry in Docker for RFdiffusion3 constrained design.
yjcyxkyabodybuilder3
Predict antibody structures from FASTA heavy and light chains using protein language model embeddings.
yjcyxkyalphafold3
Predict joint biomolecular structures for proteins, DNA/RNA, ligands, and ions.
yjcyxkyrfdiffusion
Generate protein backbones and scaffolds via diffusion models.
yjcyxkybindcraft
Run BindCraft binder design pipelines inside Docker with configurable algorithms.
yjcyxkybepipred3
Predict linear B-cell epitopes from protein sequences using ESM-2 embeddings.
yjcyxkypxdesign
Design de novo protein binders with diffusion-model generators and confidence filtering.
yjcyxkyhumatch
Align, classify, and humanise antibody sequences with Humatch in Docker.
yjcyxkyiggm
Generate antibody sequences and structures conditioned on antigen targets.
yjcyxkyboltzgen
Design protein binders with diffusion-based generative models.
yjcyxkyopenfold3
Predict biomolecular structures from proteins, DNA, RNA, and ligands on GPU.
yjcyxkyproteinmpnn
Generate amino acid sequences that fold into a specified backbone using ProteinMPNN.
yjcyxkyrosettacommons-rosetta
Automate macromolecular modeling tasks with Rosetta in a Docker container.