alterlab-gwas
CommunityQuery GWAS Catalog SNP-trait associations quickly.
Education & Research#bioinformatics#summary-statistics#gwas-catalog#genetic-epidemiology#rs-id#trait-search#snp-trait
AuthorAlterLab-IEU
Version1.0.0
Installs0
System Documentation
What problem does it solve?
The GWAS Catalog provides curated SNP-trait associations; this skill enables programmatic access to retrieve variant and trait data, p-values, and study metadata for analyses.
Core Features & Use Cases
- Variant lookups: Query by rs ID to fetch all trait associations and p-values.
- Trait and gene searches: Retrieve associations by trait (EFO) or nearby genes to explore pleiotropy.
- Data access & integration: Access summary statistics for studies with deposited data and cross-reference with external resources.
Quick Start
Query associations for a given rs ID or trait and return top GWAS results.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
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Please help me install this Skill: Name: alterlab-gwas Download link: https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/archive/main.zip#alterlab-gwas Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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