annotation_for_gene_list

What problem does it solve?

This skill builds a structured annotation table for one gene or a gene list, delivering a concise yet information-rich view of identity, protein features, domain composition, GO terms, pathway associations, and disease context.

Core Features & Use Cases

• Aggregate per-gene annotations into a clean, analysis-ready table.
• Resolve identifiers and aliases via MyGene.info; map to approved symbols and standard IDs (Entrez, Ensembl, UniProt).
• Retrieve or summarize protein-level information including protein name, length, basic function, GO terms, domains, and disease associations.
• Provide pathway context via Reactome and KEGG annotations with concise summaries.
• Output as TSV or CSV for downstream analyses and pipeline integration.
• Use cases: quick one-gene reports, batch annotation for gene lists, or generating input tables for downstream enrichment or plotting.

Quick Start

Place one gene per line in a text file and run the script to generate a TSV or CSV annotation table.