arboreto
CommunityInfer GRNs with scalable Arboreto
Authorjackspace
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
Core Features & Use Cases
- Basic GRN inference from expression data
- Distributed computing with Dask
- Output interpretation and filtering
Quick Start
Run grnboost2 on an expression matrix with a seed for reproducibility.
Dependency Matrix
Required Modules
arboretopandasnumpyscikit-learndaskdistributed
Components
references
đź’» Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: arboreto Download link: https://github.com/jackspace/ClaudeSkillz/archive/main.zip#arboreto Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.