biblio-batch-curate

Name: biblio-batch-curate
Availability: InStock
Author: arashshahidi1997

Ingest DOIs and PDFs to compile an indexed bibliography.

1|Updated Mar 9, 2026

Search Tags:#indexing #bibliography #docling #grobid #batch-ingest #pdf-fetch

Ready to run

npx skills add https://github.com/arashshahidi1997/projio --skill biblio-batch-curate

💬 Prompt for ChatGPT / Claude Chat▼

Please help me install this Agent Skill.
Skill: biblio-batch-curate
Source: https://github.com/arashshahidi1997/projio/tree/main/docs/prompts/skills/biblio-batch-curate
Command: npx skills add https://github.com/arashshahidi1997/projio --skill biblio-batch-curate

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Streamlines the full bibliography lifecycle, transforming raw DOI discoveries into a scalable, indexed literature library ready for search and manuscript tooling.

Core Features & Use Cases

Ingest DOIs and merge bibliographies to consolidate sources.
Fetch PDFs, run docling extraction, and prepare content for review.
Validate PDFs and compile BibTeX, then sync with the search index.
Handle asynchronous tasks with polling for large batches to keep workflows responsive.
Use after bulk literature discovery, Zotero exports, or periodic library refresh.

Quick Start

Run the workflow to ingest DOIs, merge sources, fetch PDFs, validate, extract, compile, and index the bibliography.

Frequently Asked Questions about biblio-batch-curate

High-intent search queries and answers about installing and using this skill.

FAQPage Schema

How do I automate batch PDF extraction and bibliography indexing from DOIs?▼

You can automate bibliography indexing by ingesting DOIs to fetch PDFs, running docling and grobid extraction, validating files, and compiling BibTeX to sync with a search index. The workflow enforces end-to-end steps with status reporting and handles asynchronous tasks.

What is the best way to consolidate Zotero exports into a clean BibTeX library?▼

Consolidating Zotero exports into a clean BibTeX library requires merging bibliographic sources, fetching linked PDFs, validating content, and compiling the entries. This workflow automates that lifecycle while applying quality checks and indexing the output for search.

How does asynchronous polling work when ingesting large batches of bibliographic data?▼

Asynchronous polling for large bibliographic batches keeps workflows responsive by periodically checking task status. This approach accommodates varying batch sizes during PDF fetching, docling extraction, and indexing without blocking the execution pipeline.

Can I use docling and grobid together for PDF text extraction in a literature review?▼

Yes, docling and grobid are integrated sequentially within the workflow to extract and parse content from fetched PDFs. Running these tools prepares the literature data for validation, expansion, and final compilation into an indexed bibliography.

What steps are required to build a searchable literature library from raw DOI discoveries?▼

Building a searchable library from raw DOIs involves ingesting identifiers, merging sources, fetching PDFs, validating files, running extraction, compiling BibTeX, and syncing to a search index. Guardrails enforce each step sequentially to produce clean, indexed output.