bio-crispr-screens-base-editing-analysis
OfficialQuantify base and prime editing outcomes.
Authorstellaromics
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Analyzes base editing and prime editing outcomes from CRISPR experiments, quantifying editing efficiency, bystander edits, and indel frequencies to compare editing strategies.
Core Features & Use Cases
- Quantification of editing efficiency: measure target base changes across samples and conditions.
- Bystander and indel analysis: assess unintended edits within the editing window and indel frequencies.
- Comparative analyses: contrast ABE vs CBE performance and evaluate prime editing fidelity across datasets.
- Use Case: Researchers can compare base editor performance between guides and generate a consolidated report of editing metrics.
Quick Start
Run the base editing analysis on your amplicon sequencing data to obtain editing metrics.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-crispr-screens-base-editing-analysis Download link: https://github.com/stellaromics/fast-bioinfo/archive/main.zip#bio-crispr-screens-base-editing-analysis Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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