bio-pathway-reactome
CommunityReactome pathway enrichment for gene lists.
Data & Analytics#visualization#reactome#gene-list#bioconductor#pathway-enrichment#gsea#enrichPathway
Authorya-way
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Enables researchers to identify biologically meaningful Reactome pathways that are overrepresented in a given gene list, turning raw gene data into interpretable pathway insights.
Core Features & Use Cases
- Over-representation analysis with enrichPathway to identify enriched Reactome pathways from a gene set.
- GSEA support using gsePathway to detect coordinated shifts in pathways across a ranked gene list.
- Cross-species applicability supporting human and common model organisms, with visualization and browser viewing of pathways.
Quick Start
Provide your significant genes or a ranked gene list to run Reactome pathway enrichment and view the top enriched pathways.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
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Please help me install this Skill: Name: bio-pathway-reactome Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-pathway-reactome Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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