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devMoez
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bioinformatics

Index and fetch curated bioinformatics skills from bioSkills and ClawBio repositories.

1|Updated May 16, 2026
Search Tags:#bioinformatics#genomics#pharmacogenomics#sequencing#variant calling#single-cell rna-seq#pipeline reference
One-click install
npx skills add https://github.com/devMoez/titan --skill bioinformatics-devmoez
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: bioinformatics
Source: https://github.com/devMoez/titan/tree/main/optional-skills/research/bioinformatics
Command: npx skills add https://github.com/devMoez/titan --skill bioinformatics-devmoez

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

It eliminates the time-consuming task of searching for the right computational biology pipeline or parameter guide by acting as a gateway that points you directly to curated bioinformatics skill content.

Core Features & Use Cases

  • On-demand domain skill indexing: Routes queries to the most relevant genomics, sequencing, and computational biology topic without you manually browsing multiple repositories.
  • Reference-first retrieval from two libraries: Pulls domain-specific guidance from bioSkills (parameter guides, decision trees, code patterns) and points to runnable pipeline bundles from ClawBio.
  • Broad coverage across omics: Supports tasks spanning genomics, transcriptomics, single-cell RNA-seq, variant calling/annotation, epigenomics, pharmacogenomics, microbiome, structural biology, proteomics, and more.

Use Case: You need help performing variant calling and interpret results; this gateway helps you locate expert reference materials for the correct subtopic and then follow the provided guidance.

Quick Start

Ask for the bioinformatics workflow you need (for example, “I want a reference for variant calling with best-practice filtering and VCF interpretation”) and then follow the fetched skill’s domain guidance.

Frequently Asked Questions about bioinformatics

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I find the right bioinformatics pipeline for variant calling and VCF interpretation?▼

To find the right variant calling pipeline, this bioinformatics gateway indexes and fetches curated reference materials, allowing you to retrieve expert guidance on best-practice filtering and VCF interpretation without manually browsing multiple repositories.

What is the best way to locate reference guides for single-cell RNA-seq analysis?▼

Locating reference guides for single-cell RNA-seq analysis is done by querying the gateway, which routes your request to fetch curated domain skills and parameter guides covering transcriptomics and single-cell workflows from upstream libraries.

Can I use this to run executable genomics pipelines directly, or is it just for reference?▼

You cannot run executable pipelines directly; this gateway requires cloning upstream repositories to retrieve SKILL and README content, serving strictly as expert reference for genomics workflows rather than providing native executables.

Does this tool support pharmacogenomics, metagenomics, and epigenomics workflows?▼

Yes, the tool supports pharmacogenomics, metagenomics, and epigenomics workflows by indexing a broad range of omics skills, fetching domain-specific decision trees, code patterns, and parameter guides on demand.

How do I get started with bioinformatics workflow discovery for read QC and alignment?▼

To start workflow discovery for read QC and alignment, simply ask for the specific bioinformatics topic needed; the gateway resolves the query and fetches the relevant curated skill content for you to follow.

Why do I need to clone repositories to access computational biology parameter guides?▼

You need to clone repositories because the gateway fetches content from upstream bioSkills and ClawBio libraries, retrieving domain-specific parameter guides and runnable pipeline bundles directly from these external sources.

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