skills.rest
peteromallet
peteromalletCOMMUNITY
Explore all skills by this author →
𝕏@peteromalletGitHub

bioinformatics

Indexes and exposes BioSkills reference material and ClawBio runnable pipelines for bioinformatics workflows.

97|8|Updated Mar 20, 2026
Search Tags:#bioinformatics#genomics#pipelines#repositories#learning-resources#reference-materials
One-click install
npx skills add https://github.com/peteromallet/megaplan --skill bioinformatics-peteromallet
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: bioinformatics
Source: https://github.com/peteromallet/megaplan/tree/main/megaplan/agent/optional-skills/research/bioinformatics
Command: npx skills add https://github.com/peteromallet/megaplan --skill bioinformatics-peteromallet

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Accessing domain-specific bioinformatics knowledge quickly without maintaining large, diverse reference libraries.

Core Features & Use Cases

  • Indexes and exposes two primary knowledge sources: bioSkills (reference material) and ClawBio (runnable pipelines), enabling targeted domain guidance.
  • Provides clear instructions to locate, clone, and read domain SKILL.md entries to load context for analyses.
  • Use Case: a researcher planning a genomics workflow can fetch a relevant SKILL.md to get parameters, examples, and decision trees.

Quick Start

Clone the bioSkills and ClawBio repositories and read the domain SKILL.md to start using domain-specific bioinformatics guidance.

Frequently Asked Questions about bioinformatics

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I access domain-specific bioinformatics knowledge without maintaining large reference libraries?▼

The Skill indexes two primary knowledge sources, bioSkills and ClawBio, to provide targeted guidance for genomics, transcriptomics, single-cell, pharmacogenomics, and metagenomics workflows on demand.

How do I find runnable pipelines and parameters for a genomics workflow?▼

Clone the ClawBio repository and read the frontmatter-driven SKILL.md entries to load context, parameters, examples, and decision trees for your genomics workflow.

Can I use this for single-cell, pharmacogenomics, and metagenomics analyses?▼

Yes, the indexed sources provide domain-specific guidance and runnable pipelines covering single-cell, pharmacogenomics, and metagenomics workflows alongside genomics and transcriptomics.

Do I need internet access to fetch bioinformatics reference materials and pipelines?▼

Yes, internet access is required because the Skill fetches reference materials and pipelines on demand from the bioSkills and ClawBio repositories rather than storing them locally.

What's the best way to load context for a transcriptomics analysis from an indexed source?▼

Locate and read the relevant domain SKILL.md entry from the cloned repositories; its frontmatter-driven structure provides the specific guidance and context needed for your transcriptomics analysis.

Related Skills

Explore More Education & Research Skills→
matthew-johnsonmatthew-johnson

bioinformatics

Index bioinformatics skills and reference materials from bioSkills and ClawBio libraries.

Community
Intermediate
afel6afel6

bioinformatics

Index and fetch bioinformatics reference skills and runnable pipelines.

Community
Intermediate
richardnguyen0715richardnguyen0715

bioinformatics

Fetch and index bioinformatics tools and libraries from bioSkills and ClawBio repositories.

Community
Advanced
dangelesdangeles
6

software-developer

Build bioinformatics CLI tools and libraries from formal specifications.

Community
Advanced