biomni

Execute complex biomedical research tasks across genomics, drug discovery, and clinical analysis.

557|98|Updated Nov 7, 2025
One-click install
npx skills add https://github.com/jimmc414/Kosmos --skill biomni-jimmc414
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: biomni
Source: https://github.com/jimmc414/Kosmos/tree/main/kosmos-claude-scientific-skills/scientific-skills/biomni
Command: npx skills add https://github.com/jimmc414/Kosmos --skill biomni-jimmc414

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill automates complex, multi-step biomedical research tasks, from hypothesis generation and experiment design to data analysis and knowledge synthesis, significantly accelerating scientific discovery.

Core Features & Use Cases

  • Autonomous Research Cycles: Designs and executes experiments, analyzes data, and synthesizes findings.
  • Cross-Domain Expertise: Covers genomics, drug discovery, molecular biology, clinical analysis, and more.
  • Integrated Knowledge: Leverages ~11GB of biomedical databases and literature.
  • Use Case: Design a CRISPR screen to identify genes regulating a specific cellular process, analyze single-cell RNA-seq data to discover novel cell types, or predict ADMET properties for drug candidates.

Quick Start

Initialize the biomni agent and execute your biomedical research question.

Frequently Asked Questions about biomni

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate single-cell RNA-seq analysis to discover novel cell types?

An autonomous AI agent automates single-cell RNA-seq analysis by executing multi-step biological reasoning and code generation to process raw genomic data and identify novel cell types. It leverages integrated biomedical databases to synthesize analytical findings.

Can I use an AI agent to design CRISPR screens for specific cellular processes?

Yes, an autonomous biomedical research agent can design CRISPR screens to identify genes regulating specific cellular processes. It generates hypotheses, designs experiments, and retrieves knowledge from integrated databases to support the screening workflow.

What is the best way to predict ADMET properties for drug candidates?

Predicting ADMET properties for drug candidates is handled by an autonomous AI agent that performs multi-step molecular reasoning and knowledge retrieval. It integrates biomedical databases to analyze drug discovery data and generate property predictions.

Does autonomous biomedical research require local integrated databases for GWAS interpretation?

Autonomous biomedical research leverages approximately 11GB of integrated biomedical databases and literature for GWAS interpretation. The agent framework retrieves knowledge from this integrated data to execute multi-step clinical analysis tasks.

How do I execute multi-step biological reasoning for genomics data analysis?

Multi-step biological reasoning for genomics data analysis is executed by initializing an autonomous AI agent framework that generates and runs code automatically. It processes complex genomics tasks by retrieving knowledge from integrated biomedical databases.

What are the limitations of using an autonomous research agent for clinical analysis?

The autonomous research agent is designed for complex clinical analysis and biomedical knowledge synthesis, but its scope is limited to the integrated biomedical databases and literature provided within the framework. It relies on automated code generation for data execution.