brain-visualization
OfficialVisualize neuroimaging results with figures
AuthorCUHK-AIM-Group
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Turning processed neuroimaging outputs into publication-ready figures and 3D assets to aid interpretation and communication of results.
Core Features & Use Cases
- 3D brain connectivity visualization from atlas coordinates and ROI-to-ROI connectivity matrices.
- Atlas-based regional activation summaries (zALFF-like metrics) with coordinates for publication-ready tables.
- FreeSurfer surface export to colored PLY meshes for downstream 3D rendering.
Quick Start
Visualize the latest atlas-connectivity, zALFF, and FreeSurfer surface outputs as publication-ready figures using the provided atlas, template, and data paths.
Dependency Matrix
Required Modules
numpypandasnibabelnilearnmatplotlib
Components
scripts
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: brain-visualization Download link: https://github.com/CUHK-AIM-Group/NeuroClaw/archive/main.zip#brain-visualization Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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