cellxgene
CommunityInteractive single-cell data explorer.
AuthorCHENyiru3
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Quickly discovering cell types and gene expression patterns in large single-cell RNA-seq datasets requires an intuitive visualization tool that hides data wrangling complexity.
Core Features & Use Cases
- Interactive exploration of embeddings (UMAP, t-SNE) and gene expression across clusters.
- Shareable visualizations and datasets, with optional programmatic access via cellxgene-census.
- Use cases include dataset validation, cell-type annotation review, teaching demonstrations, and collaborative figure creation.
Quick Start
Launch the viewer with your h5ad dataset to open an interactive visualization in your browser.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: cellxgene Download link: https://github.com/CHENyiru3/AI-Skills-Collections/archive/main.zip#cellxgene Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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