clinical-decision-support

Generate publication-ready clinical decision support documents from cohort data.

18|1|Updated Dec 27, 2025
One-click install
npx skills add https://github.com/LogauaEngstrom/claude-scientific-skills --skill clinical-decision-support-logauaengstrom
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: clinical-decision-support
Source: https://github.com/LogauaEngstrom/claude-scientific-skills/tree/main/scientific-skills/clinical-decision-support
Command: npx skills add https://github.com/LogauaEngstrom/claude-scientific-skills --skill clinical-decision-support-logauaengstrom

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires pandas, numpy, scipy, lifelines, matplotlib, scikit-learn, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

Generate professional clinical decision support documents for pharmaceutical and clinical research settings, enabling population-level analyses, evidence synthesis, and guideline development.

Core Features & Use Cases

  • Biomarker-guided Patient Cohort Analysis: biomarker-stratified analyses with survival or outcome metrics.
  • Treatment Recommendation Reports: GRADE-graded guidelines with decision algorithms and management pathways.
  • Publication-ready Outputs: LaTeX/PDF documents with professional formatting, templates, and regulatory-ready standards.

Quick Start

Generate publication-ready CDS documents from cohort data by providing a dataset and disease context.

Frequently Asked Questions about clinical-decision-support

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I generate clinical decision support guidelines from patient cohort data?

You can generate clinical decision support guidelines by processing patient cohort data through survival analysis and GRADE evidence grading, which produces publication-ready PDF documents with treatment recommendations. This requires providing your dataset and disease context.

Can I use Python libraries like pandas and lifelines for biomarker-stratified cohort analysis?

Yes, biomarker-stratified cohort analysis is supported using pandas for data manipulation and lifelines for survival analysis. These Python dependencies enable population-level outcome metrics and biomarker integration within your clinical research datasets.

What is GRADE evidence grading and how does it apply to treatment recommendation reports?

GRADE evidence grading systematically evaluates clinical evidence quality to generate treatment recommendation reports. It integrates survival analysis and biomarker data to produce decision algorithms and management pathways formatted for regulatory compliance.

How do I create publication-ready PDF reports for clinical research using LaTeX?

You can create publication-ready PDF reports by using LaTeX templates that format clinical decision support documents. The system outputs professional documents with biomarker-stratified analyses, survival metrics, and GRADE-graded guidelines.

Does this clinical decision support tool work for pharmaceutical research contexts?

Yes, clinical decision support generation is designed for pharmaceutical and clinical research settings. It supports biomarker-guided patient cohort analysis and evidence-based treatment guideline development tailored for regulatory-ready pharmaceutical outputs.

What are the limitations of using scikit-learn and scipy for clinical cohort analysis?

Clinical cohort analysis using scikit-learn and scipy focuses on population-level statistical modeling rather than individual patient diagnosis. It requires structured cohort datasets and is specialized for research guideline generation, not direct clinical practice.