clinical-reports

Format clinical reports from patient data using CARE and ICH-E3 guidelines.

1|Updated Mar 11, 2026
One-click install
npx skills add https://github.com/SciMate-AI/scicli --skill clinical-reports-scimate-ai
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: clinical-reports
Source: https://github.com/SciMate-AI/scicli/tree/main/internal/skills/bundled/claude-scientific-skills/skills/clinical-reports
Command: npx skills add https://github.com/SciMate-AI/scicli --skill clinical-reports-scimate-ai

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

Clinicians and research teams spend excessive time turning scattered notes into comprehensive, regulation-compliant clinical reports. This Skill provides templates, frontmatter-driven guidance, and automated checks to ensure privacy, regulatory alignment, and high-quality documentation for CARE case reports, radiology/pathology/lab diagnostics, CSR, and patient documentation (SOAP, H&P, discharge summaries).

Core Features & Use Cases

  • CARE-compliant case report templates and CARE checklist integration for journal submissions
  • Diagnostic and trial report templates aligned with CAP/ACR/CLSI/LL standards; CSR and SAE reporting workflows
  • De-identification, regulatory compliance, and validation tooling (HIPAA, FDA, ICH-GCP)
  • Reference and asset integration for end-to-end report generation, validation, and publication-ready output

Quick Start

Generate a compliant clinical report by applying CARE/ICH-E3 templates and running the built-in validation scripts against your patient data.

Frequently Asked Questions about clinical-reports

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I generate clinical reports that comply with CARE and ICH-E3 guidelines?

Generate CARE and ICH-E3 compliant clinical reports by applying built-in templates to patient data and running validation scripts. This ensures regulatory alignment, de-identification, and publication-ready output for case reports and trial documentation.

What templates are available for diagnostic and patient care reporting?

Diagnostic and patient care templates cover radiology, pathology, lab reports, SOAP notes, H&P, and discharge summaries. These templates align with CAP, ACR, and CLSI standards to streamline clinical documentation workflows.

Does this clinical reporting tool handle HIPAA de-identification and regulatory compliance?

Yes, HIPAA de-identification and regulatory compliance are handled through built-in validation tools. The scripts check patient data against HIPAA, FDA, and ICH-GCP standards to ensure privacy and regulatory alignment.

Can I use these templates for CSR and SAE reporting workflows?

Yes, you can use these templates for Clinical Study Reports (CSR) and Serious Adverse Event (SAE) reporting workflows. The built-in scripts and references guide formatting to meet regulatory submission requirements.

What is the best way to format a CARE case report for journal submission?

Format a CARE case report for journal submission by applying the CARE-compliant template and integrating the CARE checklist. The validation scripts check structural completeness to ensure publication-ready output.

Are there limitations when using automated validation for clinical trial documentation?

Automated validation for clinical trial documentation checks structural compliance against ICH-E3 and CARE guidelines but requires properly structured input data. Users must ensure initial patient data accuracy before running the validation scripts.