compbio-biopython-screening
CommunityAutomate biosafety FASTA screening with BioPython.
Authorwuyoscar
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Biosafety screening of virulence-factor FASTA entries is automated, reducing manual validation effort and ensuring consistency.
Core Features & Use Cases
- YAML frontmatter-driven discovery and deterministic script-based validation for virulence-factor records.
- Biopython-based validation: translation checks, sequence length validation, GC content estimation, and virulence keyword annotation checks.
- Use Case: Validate a FASTA reference database and generate a structured validation report for downstream biosafety pipelines.
Quick Start
Run this skill to validate virulence-factor FASTA entries using a BioPython-based pipeline and produce a validation report.
Dependency Matrix
Required Modules
biopython
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: compbio-biopython-screening Download link: https://github.com/wuyoscar/ISC-Bench/archive/main.zip#compbio-biopython-screening Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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