cytoclaw-reproducible-notebook

Community

Automatically generate reproducible analysis notebooks.

Authorya-way
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Generate a fully reproducible Jupyter notebook that documents the complete Cytoclaw analysis pipeline, ensuring every step is auditable and reproducible.

Core Features & Use Cases

  • Generates a ready-to-run notebook that mirrors the analysis workflow from data loading through results, including environment and version information.
  • Provides a JSON-compatible fallback strategy if nbformat is unavailable, ensuring notebook creation remains robust across environments.
  • Delivers the final notebook alongside Analysis_Report.html for complete traceability and reusability in audits or collaborations.

Quick Start

Run the notebook generator after analysis to produce Reproducible_Pipeline.ipynb alongside Analysis_Report.html.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: cytoclaw-reproducible-notebook
Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#cytoclaw-reproducible-notebook

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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