Query NCBI Gene via E-utilities and Datasets API for gene annotations.
npx skills add https://github.com/biomaps-infra/blender-opencode --skill db-gene
Please help me install this Agent Skill. Skill: db-gene Source: https://github.com/biomaps-infra/blender-opencode/tree/main/.opencode/skills/db-gene Command: npx skills add https://github.com/biomaps-infra/blender-opencode --skill db-gene
This Skill streamlines the process of accessing and analyzing gene information from the NCBI Gene database, enabling researchers to quickly retrieve, query, and understand gene-specific data.
Use the db-gene skill to find the human gene BRCA1 and retrieve its description and chromosomal location.
High-intent search queries and answers about installing and using this skill.
To query the NCBI Gene database, you can search for genes by symbol, ID, or biological context. The Skill uses E-utilities and Datasets API to retrieve comprehensive information including RefSeqs, GO annotations, locations, and phenotypes.
Yes, you can retrieve GO annotations and chromosomal locations for multiple human genes in batch. The Skill supports batch lookups to efficiently process multiple genes simultaneously while handling API rate limits.
The best way to find human genes associated with a specific disease is to search the NCBI Gene database by biological context. This retrieves gene-specific data including RefSeq IDs and chromosomal locations for further functional analysis.
Querying NCBI E-utilities supports retrieving RefSeqs and phenotypes for gene annotation. The Skill fetches detailed gene annotations, sequences, and related information via the E-utilities and Datasets API for functional analysis.
Batch gene lookup failures when querying many NCBI Gene IDs often stem from API rate limits. The Skill handles API rate limits to manage efficient batch lookups, but large requests may still require splitting into smaller batches.
K-Dense-AIQuery NCBI Gene data via E-utilities and Datasets API for annotations.
robinbarvaagQueries NCBI Gene database via E-utilities and Datasets API for gene information.
Teng-bioRetrieve and analyze biological sequences from NCBI and ENA databases.
SologaQuery NCBI Gene database for gene information via E-utilities and Datasets API.
