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deep-research

Organize a six-phase literature-review workflow with phase-gated outputs and BibTeX references.

38|3|Updated May 7, 2026
Search Tags:#workflow#notes#phases#literature-review#paper-database
One-click install
npx skills add https://github.com/Chanw-research/claude-code-paper-writing --skill deep-research-chanw-research
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: deep-research
Source: https://github.com/Chanw-research/claude-code-paper-writing/tree/main/skills/literature-review/deep-research
Command: npx skills add https://github.com/Chanw-research/claude-code-paper-writing --skill deep-research-chanw-research

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Systematic, six-phase literature reviews to organize notes, build a curated paper database, and produce a synthesized final report, ensuring transparency and reproducibility.

Core Features & Use Cases

  • Structured six-phase workflow (Frontier, Survey, Deep Dive, Code & Tools, Synthesis, Compilation) with phase-gated outputs.
  • Generates phase-specific notes and a centralized paper database that supports deduplication, tagging, and export.
  • Produces a final compiled report with citations and BibTeX references, suitable for publication or internal knowledge bases.

Quick Start

Initiate the six-phase workflow for a given topic to automatically generate phase notes and a final compiled report.

Frequently Asked Questions about deep-research

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I structure a systematic literature review workflow?▼

A literature review workflow organizes research through a six-phase process: Frontier, Survey, Deep Dive, Code & Tools, Synthesis, and Compilation. It systematically generates frontier notes, a paper database, and a final report.

What is the best way to organize notes and build a paper database for research?▼

Organize notes by generating a centralized paper database that supports deduplication, tagging, and BibTeX exports. This ensures research transparency and reproducibility throughout the phased workflow.

Can I export BibTeX references for citations from my literature review?▼

Yes, you can export BibTeX references for citations. The workflow generates BibTeX references alongside a final compiled report, ensuring citations are ready for publication or internal knowledge bases.

How does a phased literature review process work for generating a final report?▼

A phased literature review process works by gating outputs across six stages. Each phase generates specific deliverables like deep-dive notes and code mappings, which are ultimately synthesized into a compiled report with citations.

When do I need a phase-gated workflow for my literature review?▼

You need a phase-gated workflow when conducting systematic literature reviews requiring strict organization. It ensures phase-specific outputs are completed sequentially, stored in topic directories, and compiled into a reproducible final report.

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