download-encode
CommunityStreamline ENCODE data downloads with organized, verified files.
Authorammawla
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill simplifies the process of downloading genomic data files from ENCODE, ensuring data integrity and organized storage.
Core Features & Use Cases
- Targeted File Retrieval: Download specific files by accession, experiment, or output type.
- Organized Data Storage: Arrange downloaded files by experiment, format, or in a flat structure.
- Batch Operations: Preview large downloads with dry runs and execute multi-file downloads efficiently.
- Integrity Verification: Use MD5 checksum validation to confirm data authenticity.
- Use Case: Suppose you need to download all peak files and signal tracks from multiple experiments; this skill allows you to search, filter, validate, and organize them seamlessly.
Quick Start
Ask the tool to search for experiments, preview available files, then download and verify the selected data.
Dependency Matrix
Required Modules
encode_download_filesencode_batch_downloadencode_manage_credentials
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: download-encode Download link: https://github.com/ammawla/encode-toolkit/archive/main.zip#download-encode Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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