drug-repurposing-strategist

Match OM-associated genes to approved drug targets and rank repurposing candidates.

4|1|Updated Jan 8, 2024
One-click install
npx skills add https://github.com/OpenSourcePharmaFoundation/ospf-ayurveda-kg --skill drug-repurposing-strategist
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: drug-repurposing-strategist
Source: https://github.com/OpenSourcePharmaFoundation/ospf-ayurveda-kg/tree/main/.claude/skills/drug-repurposing-strategist
Command: npx skills add https://github.com/OpenSourcePharmaFoundation/ospf-ayurveda-kg --skill drug-repurposing-strategist

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

This Skill reduces the time needed to generate testable hypotheses for Oral Mucositis (OM) by systematically linking OM-associated biology to targets and mechanisms of already approved drugs.

Core Features & Use Cases

  • Target-overlap repurposing: Identifies OM-relevant genes and maps them to approved drugs via drug-target data to shortlist candidates with plausible target engagement.
  • Mechanism-of-action alignment: Checks whether each candidate’s mechanism direction fits what OM needs across inflammatory, oxidative, and healing phases.
  • Feasibility scoring and structured outputs: Ranks candidates using a weighted framework covering overlap strength, safety context, route compatibility, and evidence level, then produces consistent candidate reports.

Quick Start

Use the drug-repurposing-strategist skill to generate a ranked repurposing candidate report for approved OM-relevant drugs using the processed CSV datasets under data/processed/.

Frequently Asked Questions about drug-repurposing-strategist

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I identify approved drugs for oral mucositis repurposing?

Drug repurposing for oral mucositis identifies approved candidates by matching OM-associated genes to drug targets and validating mechanism direction. It cross-references OM gene-disease CSV data with approved drug target, mechanism, indication, and safety CSV files to produce structured candidate reports and scores.

What is target overlap analysis in drug repurposing?

Target overlap analysis in drug repurposing identifies disease-relevant genes and maps them to approved drugs via drug-target data. This shortlists candidates with plausible target engagement by systematically linking disease-associated biology to targets and mechanisms of already approved drugs.

How do I rank drug repurposing candidates using a knowledge graph?

You rank drug repurposing candidates using a weighted framework covering overlap strength, safety context, route compatibility, and evidence level. This feasibility scoring produces consistent candidate reports and scores for systematic OM candidate prioritization and network-pharmacology exploration.

Can I generate repurposing hypotheses for oral mucositis from CSV datasets?

Yes, you can generate testable repurposing hypotheses for oral mucositis from CSV datasets by cross-referencing OM gene-disease data with approved drug target, mechanism, indication, and safety CSV files. This produces ranked candidate reports for evidence-grounded hypothesis formulation.

Does drug repurposing check mechanism of action alignment for inflammatory and healing phases?

Drug repurposing checks mechanism of action alignment by verifying whether each candidate's mechanism direction fits what oral mucositis needs across inflammatory, oxidative, and healing phases. This mechanism validation ensures candidates match the disease's biological requirements.

What data do I need for systematic oral mucositis candidate generation?

For systematic oral mucositis candidate generation, you need processed CSV datasets under data/processed/ containing OM gene-disease associations, plus approved drug target, mechanism, indication, and safety CSV files. These inputs enable target overlap analysis and ranked prioritization.