eln-openbis
CommunityManage and track life-science samples and experiments with openBIS LIMS/ELN.
Authorpradyumnasagar
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill streamlines the management and tracking of life-science samples and experiments within the openBIS LIMS/ELN, simplifying workflows for core facilities and multi-user labs.
Core Features & Use Cases
- Sample Tracking: Track samples across collections, spaces, datasets, and vocabularies.
- Instrument Integration: Connect with instruments and high-throughput pipelines.
- Access Control: Enforce lab/team-level access control for shared resources.
- Use Case: Ideal for core facilities handling genomics, proteomics, or screening campaigns, or for replacing paid LIMS with an open-source solution.
Quick Start
Use the eln-openbis skill to create a new sample and dataset for a sequencing run.
Dependency Matrix
Required Modules
pyopenBISpandasrequests
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: eln-openbis Download link: https://github.com/pradyumnasagar/open-research-skills/archive/main.zip#eln-openbis Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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