exploratory-data-analysis

Detect 200+ scientific data file formats and generate markdown EDA reports.

48|6|Updated Mar 9, 2026
One-click install
npx skills add https://github.com/qinyan-ai/qinyan-academic-skills --skill exploratory-data-analysis-qinyan-ai
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: exploratory-data-analysis
Source: https://github.com/qinyan-ai/qinyan-academic-skills/tree/main/skills/11-%E6%95%B0%E6%8D%AE%E5%88%86%E6%9E%90%E4%B8%8E%E7%BB%9F%E8%AE%A1%E5%BB%BA%E6%A8%A1/exploratory-data-analysis
Command: npx skills add https://github.com/qinyan-ai/qinyan-academic-skills --skill exploratory-data-analysis-qinyan-ai

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires numpy, pandas, h5py, biopython, Pillow, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

This Skill enables automatic exploratory data analysis (EDA) across a wide range of scientific data formats, helping users quickly understand structure, quality, and content, and to generate a comprehensive markdown report.

Core Features & Use Cases

  • Automatic detection of 200+ scientific file formats and extraction of format-specific metadata.
  • Automated quality assessment, statistical summaries, and tailored recommendations for downstream analysis.
  • Markdown report generation that documents findings and guidance for subsequent steps.

Quick Start

Run a full exploratory data analysis on a scientific data file to generate a formatted markdown report.

Frequently Asked Questions about exploratory-data-analysis

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I perform exploratory data analysis on scientific data files with unknown formats?

Exploratory data analysis on unknown scientific files is automated by detecting over 200 formats, extracting contextual metadata, and generating a structured markdown report. It assesses data quality and provides statistical summaries tailored to domains like chemistry, genomics, and imaging.

Can I automatically generate an EDA report for multi-format datasets including genomics and proteomics?

Yes, automated EDA report generation supports multi-format analysis across genomics and proteomics. It identifies the specific file format, pulls format descriptions from reference files, and outputs a structured markdown document with statistical summaries and data quality assessments.

Does this automatic file format detection work with HDF5 and image files?

Automatic file format detection works with HDF5 and image files by utilizing dependencies like h5py and Pillow. It auto-detects formats across diverse scientific domains, extracting contextual metadata to provide tailored recommendations for your downstream analysis.

What is the best way to assess data quality in scientific datasets before downstream analysis?

The best way to assess data quality in scientific datasets is through automated EDA, which evaluates structural integrity and content. It applies format-specific metadata extraction to generate statistical summaries and tailored recommendations for subsequent processing steps.

How do I extract contextual metadata from diverse scientific data formats?

Extracting contextual metadata from diverse scientific formats is handled by an automated discovery process that matches files against a reference of 200+ formats. This process identifies the structure and pulls format descriptions to document findings in a markdown report.

When should I use an automated EDA workflow for scientific data?

Use an automated EDA workflow for scientific data when you need to quickly understand the structure and quality of unfamiliar datasets like chemistry or proteomics files. It auto-detects formats and generates a markdown report, satisfying the need for rapid, structured insights.