gene-list-curator
CommunityCurate and normalize gene lists for analyses.
AuthorMDhewei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Curate literature-backed gene or protein lists for a requested function, pathway, molecular class, or regulator type, then normalize them into a structured table or workbook.
Core Features & Use Cases
- Build populated candidate lists by querying authoritative databases (UniProt for high-confidence entries and NCBI Gene for aliases).
- Merge and normalize data into a unified schema with fields like Gene name, Protein ID, Organism, Functional class, Evidence or role, PMID, References, and Notes.
- Use cases include transcription factors, pathway gene sets, receptor families, chromatin regulators, and methylation readers.
Quick Start
Generate a curated, publication-ready gene list for transcription factors in Homo sapiens with identifiers and references, exported as a CSV.
Dependency Matrix
Required Modules
openpyxl
Components
scriptsreferences
💻 Claude Code Installation
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Please help me install this Skill: Name: gene-list-curator Download link: https://github.com/MDhewei/bioinfor-claw/archive/main.zip#gene-list-curator Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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