gene-regulatory-networks
CommunityInfer gene regulatory networks from expression data.
Data & Analytics#bioinformatics#visualization#omics#network-inference#transcription-factor#grn#regulon
Authorzongtingwei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Automate inference of gene regulatory networks (GRNs) and regulon activity from gene expression data to reveal regulatory programs and their dynamics.
Core Features & Use Cases
- Inference of GRNs from expression matrices with optional TF priors
- Regulon scoring and perturbation-aware comparison
- Visualization of networks and regulator-centric views
- Use Case: interpret transcriptional programs in response to treatments or perturbations
Quick Start
Provide an expression matrix (and optional TF priors or chromatin features) to generate inferred networks and regulon activity visualizations.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
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Please help me install this Skill: Name: gene-regulatory-networks Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#gene-regulatory-networks Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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