genome-assembly
CommunityEnd-to-end genome assembly workflows.
Data & Analytics#scaffolding#bioinformatics#de novo#polishing#genome-assembly#contamination#assembly-quality
Authorzongtingwei
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Genome assembly workflows automate the creation of contiguous genome assemblies from sequencing reads, including scaffolding, polishing, contamination review, and QC reporting.
Core Features & Use Cases
- De novo assembly: construct contigs/scaffolds from short, long, or hybrid reads.
- Quality control and contamination checks: assess completeness and detect potential contamination.
- Reproducible pipelines: provide runnable patterns for consistent results across projects.
Quick Start
Provide short and/or long reads (with optional reference) to run the genome assembly workflow and obtain assembled contigs plus QC reports.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: genome-assembly Download link: https://github.com/zongtingwei/Bioclaw_Skills_Hub/archive/main.zip#genome-assembly Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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