genomespot-predictions
OfficialPredict genome growth optima from sequence
Authorcultivarium
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Quickly determine GenomeSPOT-predicted growth conditions for a sequenced genome by its NCBI assembly accession, enabling rapid assessment of thermophiles, psychrophiles, halophiles, alkaliphiles, and anaerobes from genome data.
Core Features & Use Cases
- Genome-to-prediction mapping: fetches predicted optimum/minimum/maximum growth temperature, pH, salinity, and oxygen tolerance for a genome.
- Broad applicability: supports queries by NCBI assembly accession (GCA/GCF) or species, and helps identify growth traits across thousands of genomes.
- Cross-reference with CVM strains: aligns CVM strain accessions to their genome predictions for quick downstream analyses.
Quick Start
Please fetch the GenomeSPOT growth predictions for genome accession GCA_000000000.1.
Dependency Matrix
Required Modules
None requiredComponents
references
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: genomespot-predictions Download link: https://github.com/cultivarium/hermes-starter-kit/archive/main.zip#genomespot-predictions Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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