genomics-ontology-starter
OfficialPrebuilt genomics lab + variant ontology for fast, governed analysis.
AuthorTextQLLabs
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides a prebuilt, governed genomics lab + variant ontology, enabling fast, accurate, and secure analysis of genomic data.
Core Features & Use Cases
- Prebuilt Ontology: Eliminates the need to build from scratch, saving time and resources.
- Governed Metrics: Ensures consistent and reliable analysis across the lab.
- Privacy and Security: Prioritizes genomic data privacy and security with default aggregate outputs and read-only access.
- Use Case: Imagine you need to analyze variant yield and diagnostic yield in your genomic data. This Skill allows you to connect your data, validate the model, and ask governed questions without leaving the Ana interface.
Quick Start
Connect this repo to Ana, connect your warehouse, and validate the model. Then, ask Ana questions like 'Show me the diagnostic yield by ClinVar version' or 'What's the average coverage adequacy for WGS assays?'.
Dependency Matrix
Required Modules
pandasnumpysqlalchemy
Components
scriptsreferencesassets
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: genomics-ontology-starter Download link: https://github.com/TextQLLabs/ontology-starter-kits/archive/main.zip#genomics-ontology-starter Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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